PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g20530
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 161aa    MW: 18682.2 Da    PI: 9.8768
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g20530genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.54.5e-2241323128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  G+rFhP+deel+ +yL k v+ k+ ++ + i+  d+y   +Pw++ +  ++ +   + k++ yfF+k +kk++ g+r  r ++  g Wk    +k+v+
  CA10g20530   4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWEIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKSVY 99 
                 59***********.9**********999.7899999996549****632322.2333333335******************8889************** PP

         NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +lvg kk   +   +  ++    W+m ey+l
  CA10g20530 100 D-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132
                 *.99*********996.45556679********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.7382159IPR003441NAC domain
SuperFamilySSF1019416.41E-224154IPR003441NAC domain
PfamPF023652.3E-135132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC DNIRLDDLYG NKKPWEIFES NSTGGDGDAK  60
NVKYFFTKLK KKKSDGRRFI RTVIGGGSWK GLDGEKSVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRSLMHYED VVLCXGFNSI *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544549.11e-100PREDICTED: uncharacterized protein LOC107844702
TrEMBLA0A2G2VW871e-109A0A2G2VW87_CAPBA; Uncharacterized protein
STRINGXP_009786835.12e-60(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-11NAC domain containing protein 2