PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA10g22430

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 330aa MW: 36448 Da PI: 8.9673

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA10g22430	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.8	3.7e-16	258	303	4	50
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + + CA10g22430 258 ERRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RQK 303 589***************************************9.333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PRINTS	PR00041	2.6E-5	108	130	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	2.6E-5	254	270	IPR001630	cAMP response element binding (CREB) protein
Gene3D	G3DSA:1.20.5.170	2.4E-14	254	302	No hit	No description
SMART	SM00338	1.7E-12	255	323	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.725	257	302	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-11	259	304	No hit	No description
CDD	cd14707	2.36E-24	259	304	No hit	No description
Pfam	PF00170	5.8E-13	259	302	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	262	277	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	2.6E-5	272	292	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence Send to blast
MVVTCGMGSQ EGGGGVIEAN PNALDRQGSL YSLTLDEVRN QLGSSGKPLN SMNLDEFVKT 60 VRTIEANQEV GGNGYGAMQH GASVHHQSSL TMTRDLSKKT VDEVWQDIQQ GGKRESVEKR 120 SPEMQLTLGE ITLEDFLVKA GVIAESNQGK RNSGLVSGVN SMALGQQAQW PHYQIPAMQQ 180 VPEHHHHQQQ QQNRQLVFMP GHPIQQPLPV VANPIMDATN PETKVTMSPA HAVGTLSDTH 240 TMGRKRAAPG DVIENSAERR QKRMIKNRES AARSRARKQA YTHELENKVS RLEEENERLK 300 RQKEIENILP SVPPPEPKYQ LRRTSSGPI*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975449	0.0	HG975449.1 Solanum pennellii chromosome ch10, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016544032.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_016544033.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_016544035.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_016544036.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	3e-94	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1U8E9X2	0.0	A0A1U8E9X2_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1U8EL04	0.0	A0A1U8EL04_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	PGSC0003DMT400018574	1e-176	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	8e-96	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]