PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g01500
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 490aa    MW: 53728.1 Da    PI: 6.7075
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g01500genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1292.4e-09201242546
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                 k  rr+++NReAAr+sR+RKka++++Le+    L++  ++Lk
  CA11g01500 201 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLSQLEQELK 242
                 7789************************98777777777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-7197262IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.484199243IPR004827Basic-leucine zipper domain
PfamPF001702.1E-6201242IPR004827Basic-leucine zipper domain
CDDcd147085.29E-21201252No hitNo description
SuperFamilySSF579591.93E-6201244No hitNo description
Gene3DG3DSA:1.20.5.1705.6E-7202245No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
PfamPF141445.3E-32286359IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MQAYKAAVVP NVTLNNNNSS GNANTMYCHS TYYLRGDEAN RNAARFADIG ELEQSAGFTQ  60
EDAVDLSRSS VYGEMRPSNV GVVSCNNNKL HFGELNTSIG STEIGSSETG VDTGRFMLQK  120
AQTAMLGAGL VGGGGGSVAL GNVQHFENWG DSGIADHSQQ TDTSTDVDTD ERNHQGQGIQ  180
HGALIAVESM DQSKIKLGDQ KTLRRLAQNR EAARKSRLRK KAYVQQLENS RLRLSQLEQE  240
LKRARQQGIF IANGYTGDQS LSAGGNGALA FDMDYARWLE EHQRLISDLR SAVNSHSGDN  300
ELRHLVDGVM SHYDEKFKLK SVAAKSDVFH MLSGMWKTPA ERCFMWLGGF RSSELLKILG  360
NHLEPLTEQQ LMGICNLQQS SQQAEDALSQ GMEALQQSLV DTLSSTSLGP TGTGNVADYM  420
GQMAIAMGKL ATLENFLYQA DLLRQQTLQQ LHRILTTRQA ARALLVISDY MSRLRALSSL  480
WLARPKDQL*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754441e-95HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015074554.10.0transcription factor TGA2.3-like
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2G2YC860.0A0A2G2YC86_CAPAN; Transcription factor PERIANTHIA
STRINGSolyc05g009660.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-139bZIP family protein