PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g03970
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 148aa    MW: 17082.7 Da    PI: 9.6428
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g03970genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.5e-092059649
         AP2  6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49
                Vr +k +g++ AeI++ +     + k ++lg+f t e+A k ++  
  CA11g03970 20 VRKRK-NGKFCAEIKHpF-----NkKMIWLGTFVTVEDASKSYESK 59
                89888.8*********55.....34****************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.9571278IPR001471AP2/ERF domain
SMARTSM003804.2E-41770IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-92063IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-122063IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MKSHKRISKN TYVKSYPIRV RKRKNGKFCA EIKHPFNKKM IWLGTFVTVE DASKSYESKN  60
LEFEELVLAK SAKMARFSKN LIKNLVLLIK LKKNQSRVTD EIEENSSMSA DENTNSSDGV  120
EEKINLFLEE ESDQELMMGI WVKISED*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025886831.11e-41ethylene-responsive transcription factor ERF119-like
TrEMBLA0A2G2YDW71e-101A0A2G2YDW7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000942301e-36(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-14ERF family protein