PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g10600
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 95aa    MW: 10782.1 Da    PI: 10.6172
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g10600genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP30.11.6e-095577224
         TCP  2 agkkdrhskihTkvggRdRRvRl 24
                a kkdrhski T+ g+RdRR+Rl
  CA11g10600 55 ASKKDRHSKINTAHGLRDRRMRL 77
                78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.5E-105679IPR005333Transcription factor, TCP
PROSITE profilePS5136910.7035794IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MVEEDSNKLD KQEEEYHEEL VLKSSKNKKD EMSSTTTSTM RRKNNKYATG AGAGASKKDR  60
HSKINTAHGL RDRRMRLTQN SSQILQFARL SPVR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567552.13e-32PREDICTED: transcription factor CYCLOIDEA-like
TrEMBLA0A2G2YFP23e-62A0A2G2YFP2_CAPAN; Uncharacterized protein
STRINGSolyc03g119770.2.17e-17(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256