PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g15230
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 272aa    MW: 30418.2 Da    PI: 4.5132
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g15230genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1759109155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVrw++ + +Wv+e+r+p   gk+ r++lg+f tae+Aa+a++ a  +l+g
  CA11g15230  59 PVYRGVRWRH-SEKWVSEVRVP---GKKSRIWLGTFPTAEMAARAHDVAVMALKG 109
                 68********.7*********8...557*********************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-1159109IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1960119IPR016177DNA-binding domain
SMARTSM003803.6E-2760123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-2960119IPR001471AP2/ERF domain
PROSITE profilePS5103220.27160117IPR001471AP2/ERF domain
PRINTSPR003673.5E-76172IPR001471AP2/ERF domain
CDDcd000181.74E-2861119No hitNo description
PRINTSPR003673.5E-78399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MDIFGNLYFD PLPPTSSICD SNGSCGKANS SNEEVVLLLA SNNTKRRGGR KKLRETRHPV  60
YRGVRWRHSE KWVSEVRVPG KKSRIWLGTF PTAEMAARAH DVAVMALKGR SACLNFADSA  120
WRLPAFRLSK FTEGENSEEV TTNDQVITQY SVDSTNWRLP TPTSATAKDI QNAAAEVAEA  180
FRLSESSEGE NSEEVIIVDQ VTQDIVIAEL PDYNMLFMDE EELFYMPGLL ANMAEGLMLP  240
PPPPPQCIDG YDDSYHMEPD DIDMSLWSYR I*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1492891e-82AC149289.1 Solanum demissum chromosome 11 clone PGEC417F14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548956.10.0PREDICTED: dehydration-responsive element-binding protein 1B-like
TrEMBLA0A2G2YGQ00.0A0A2G2YGQ0_CAPAN; Uncharacterized protein
STRINGXP_009791610.12e-88(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-51dehydration response element B1A