PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA12g09450
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family EIL
Protein Properties Length: 520aa    MW: 59208.4 Da    PI: 4.9794
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA12g09450genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3388.87.9e-119333801353
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksn...........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                 e+lk+rmwkd+m+++  k++k++ +++   a+++++++             +eq+rrkkmsraQD++LkYM+k+me+c+ qGfvYgi+pekgkpv+g+s
  CA12g09450  33 EDLKRRMWKDRMRMQTFKDNKRDMINSSICAASSSEESsivdldddssqAKQEQSRRKKMSRAQDSVLKYMVKIMEICKGQGFVYGIVPEKGKPVTGSS 131
                 89*********************8866655533333336777777777799************************************************ PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT-- CS
        EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgls 187
                 dsLr+WWk+kv+f++n+p+ai+k  +k l+  +e+ l  +++s    l++lqDTtlgSLLs+lmqhc ppqrrfpl+kg++pPWWPtG+elwwg +g+s
  CA12g09450 132 DSLREWWKDKVRFEQNAPTAIAKFLPKVLM--EENAL--DPNSCLDLLQDLQDTTLGSLLSSLMQHCVPPQRRFPLDKGLAPPWWPTGNELWWGDQGFS 226
                 ************************887666..45666..7899******************************************************** PP

                 TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3 188 kdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedveg 286
                 ++qg+ppykkphdlkkawkvsvL+  ikhms +++++r+l+ qsk+lq+km+ake++++++v+nqee ++        +l +++ k+ +s+e++ed++ 
  CA12g09450 227 QEQGPPPYKKPHDLKKAWKVSVLSGIIKHMSTNLDKMRRLVKQSKSLQNKMTAKETATWSKVVNQEEVLA--------KLAEKALKISASKEEEEDQQN 317
                 ******************************************************************9765........355577788888888888884 PP

                 XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
        EIN3 287 kkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                  + +k +   +   +a+  +          ++  + k+v    q+ ++ +se  ++f+ kns+ +ne
  CA12g09450 318 VRGKKDEYLTKIASHASNLFDGSST----VRRNDKRKGVFESYQNLNCAQSEFGVGFPYKNSRMDNE 380
                 4444444444444433333333332....22222345667788999999999999999999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-11533293No hitNo description
Gene3DG3DSA:1.10.3180.107.2E-65171297IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.32E-57173295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MVEFEEIVEP LSPMTGELVE ENQELDDEEI SYEDLKRRMW KDRMRMQTFK DNKRDMINSS  60
ICAASSSEES SIVDLDDDSS QAKQEQSRRK KMSRAQDSVL KYMVKIMEIC KGQGFVYGIV  120
PEKGKPVTGS SDSLREWWKD KVRFEQNAPT AIAKFLPKVL MEENALDPNS CLDLLQDLQD  180
TTLGSLLSSL MQHCVPPQRR FPLDKGLAPP WWPTGNELWW GDQGFSQEQG PPPYKKPHDL  240
KKAWKVSVLS GIIKHMSTNL DKMRRLVKQS KSLQNKMTAK ETATWSKVVN QEEVLAKLAE  300
KALKISASKE EEEDQQNVRG KKDEYLTKIA SHASNLFDGS STVRRNDKRK GVFESYQNLN  360
CAQSEFGVGF PYKNSRMDNE TSCFYRGKCS TDDQRRMDKQ EDLSHNLSIN NFSSLIEVQS  420
ILHEEIMAGH GEHDWMNMDI KKSFENYHIA QNANGSGLAS GSVAENFEEF WGSNVLDQLH  480
FDPATYGNMN TDVTSPEEDV LHYQAPVSVW DLGYEDTSG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-571752976128Protein ETHYLENE INSENSITIVE 3
4zds_B1e-571752976128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1343349RRNDKRK
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754430.0HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549362.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX161e-124EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2G2Y7N50.0A0A2G2Y7N5_CAPAN; Putative ETHYLENE INSENSITIVE 3-like 4 protein
STRINGXP_009792280.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-112EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]