PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG000509.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 143aa    MW: 16453.7 Da    PI: 10.0389
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG000509.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.81.1e-082558538
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
                 kr +r+++NRe+ArrsR ++++ +e L  +   L
  CCG000509.1 25 KRRKRMISNRESARRSRMKRQKHLEGLVSEKSIL 58
                 9*********************999987766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-42199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-723105No hitNo description
PROSITE profilePS502178.5422361IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-82570No hitNo description
PfamPF001708.8E-72560IPR004827Basic-leucine zipper domain
CDDcd147026.72E-122660No hitNo description
PROSITE patternPS0003602843IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MSSSLAKAGS SGSDVDGPHA MIDEKRRKRM ISNRESARRS RMKRQKHLEG LVSEKSILER  60
KIYEDNEKFV AIWQSHFALE SQNKILRDEK MKLAENLKNL QQILSGYEVP ESDQDIEVSD  120
RFLNPWQVSS PVKPITASGM FKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13843RSRMKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020190.11e-101PREDICTED: basic leucine zipper 1-like
TrEMBLB9HIQ05e-96B9HIQ0_POPTR; Uncharacterized protein
STRINGPOPTR_0008s10620.19e-97(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15536812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-23basic region/leucine zipper motif 53