PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG000565.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 200aa    MW: 22857.6 Da    PI: 7.7725
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG000565.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.6e-1584133554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  +++rr+++NRe+ArrsR RK++ ++eL + v  L +eN+ L+++l++ ++
  CCG000565.1  84 RKQRRMISNRESARRSRMRKQKHLDELWTQVVRLRTENHNLIDKLNHVSE 133
                  79*******************************************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-1680144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.54282133IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-1384133No hitNo description
PfamPF001706.1E-1384142IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-1384157No hitNo description
CDDcd147026.76E-2085136No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MLPGELTGIH YIAPDQSLIP FPANFGMMQQ SSIPAFHFNR LLNNLQSSSF PQPVREFTPQ  60
SSSLSNNSTS DESEEHQLSI IDERKQRRMI SNRESARRSR MRKQKHLDEL WTQVVRLRTE  120
NHNLIDKLNH VSECHDRVLQ ENARLKNEAS DLRQMVTDLQ IGSPYTATAL RDLAEVPCNT  180
AHVRSKSSNQ SVTSSVDLLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021268.11e-147PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC26e-37BZP43_ARATH; Basic leucine zipper 43
TrEMBLB9HIW11e-134B9HIW1_POPTR; BZIP family protein
STRINGPOPTR_0008s11260.11e-135(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.12e-41basic leucine-zipper 58
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]