PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG000598.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family G2-like
Protein Properties Length: 385aa    MW: 42395.9 Da    PI: 7.7589
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG000598.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.72e-31220275156
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                  k+r++W+peLH+rF++a+++LGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  CCG000598.1 220 KQRRCWSPELHRRFLHALRELGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 275
                  79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.525217277IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.3E-28218278IPR009057Homeodomain-like
SuperFamilySSF466893.59E-18218278IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-26220275IPR006447Myb domain, plants
PfamPF002491.9E-7222273IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0055062Biological Processphosphate ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MDFAEKIQRC GEYVEALEEE RRKIQVFERE LPLCLELVTQ AIEACKKELS GTTTEYNMHG  60
HSECSEQTSS EGPVLEEFIP IKRTHSYDEN ENENDDHQEQ QSQNNSKRNK TSISSSNNDH  120
KKKSDWLRSV HLWNHSPDPP KKQDLPRKAA VTEVKRNGAG GAFQPFLREK SIGKTSNQAI  180
AKAPISVPAS TTSSTAVVAT GGLGDGSNKK EDMDGRNQRK QRRCWSPELH RRFLHALREL  240
GGSHAATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PTIHNNSNQQ APQFVVVGGI  300
WVPPPEYAAV AATTASAETS PISAANGIYA PIAAAPPTLP QKPHHVQYEP LQSEGGGSHS  360
EGGAHSNNSP ATSSSTHTTT TSPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-13220273154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-13220273154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-13220273154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-13220273154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-13220273255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00218DAPTransfer from AT1G68670Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021741.10.0PREDICTED: probable transcription factor GLK2
SwissprotQ8VZS31e-106HHO2_ARATH; Transcription factor HHO2
TrEMBLA0A2I4KKV80.0A0A2I4KKV8_POPTR; G2-like family protein
STRINGPOPTR_0008s11630.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.16e-96G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]
  2. Sun X, et al.
    The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides.
    J. Exp. Bot., 2018. 69(7): p. 1749-1764
    [PMID:29385617]