PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG002141.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family GRAS
Protein Properties Length: 200aa    MW: 23217.6 Da    PI: 9.512
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG002141.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS21.91.9e-07142197274329
         GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvpl 329
                  +++r s+     +++ l+r+i+nvva eg +r+erh t+++ +erl++ G ++ +l
  CCG002141.1 142 TFSRVSHRFPLFSEMHLKRQISNVVASEGIDRFERHLTFSHGQERLSQDGSRSTQL 197
                  4555566666778999********************************99887766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035146.6E-5142197IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MAISNLQIFF FEEMEGPRYA ETSEVTKKVV RCFAESLARQ VHGLHPSNPI PLLPCIEMQN  60
PSHLFATTAT NYDMLETLIT GRSKPFHFID FSMVLSSRYW RCWIRKSFLL LKIIAVDQYQ  120
TKSITTRWSS ATVHMPAAYH STFSRVSHRF PLFSEMHLKR QISNVVASEG IDRFERHLTF  180
SHGQERLSQD GSRSTQLWSN