PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG003424.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 152aa MW: 17516.9 Da PI: 4.9386

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG003424.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.9	8.8e-08	55	112	6	63
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +e+ kqk Re rr+R+ Kk+ ++e e+k + eN+ Lk+++ee ++e+ l+s++ CCG003424.1 55 KEMQKQKKRETDRRYRKNKKEAVQETENKLAMTIIENENLKSTVEEFRQEIFHLTSQL 112 899************************************************9999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.2E-4	55	112	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence Send to blast
MPSTLPLFAA PAPAPAGLEE EENPVISFLA VPTPSSATDL HLPPHVYRSN GTVTKEMQKQ 60 KKRETDRRYR KNKKEAVQET ENKLAMTIIE NENLKSTVEE FRQEIFHLTS QLKLIYQRFE 120 TIYTELEKEI ECVRTENELT ECLLNDPSNI NI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002299106.1	3e-86	uncharacterized protein LOC7457698
TrEMBL	B9GLE6	6e-85	B9GLE6_POPTR; Uncharacterized protein
STRING	POPTR_0001s04210.1	1e-85	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17134	3	8