PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG006863.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 315aa    MW: 35827.4 Da    PI: 4.6697
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG006863.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.16e-15112160254
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                   ykGVr+++ +g++ AeIrd +     + r +lg++ taeeAa+a+ + ++++ 
  CCG006863.1 112 IYKGVRRRP-WGKYSAEIRDpF----LKIRLWLGTYTTAEEAAAAYKKKKEEFD 160
                  69*******.**********44....25******************99998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.13E-12111140No hitNo description
PROSITE profilePS5103217.965112172IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-15112160IPR016177DNA-binding domain
PfamPF008471.2E-7112159IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-19112159IPR001471AP2/ERF domain
SMARTSM003802.0E-13112178IPR001471AP2/ERF domain
PRINTSPR003672.6E-9113124IPR001471AP2/ERF domain
PRINTSPR003672.6E-9135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MPGLRRPILD QDRIFDQEKQ KKPAMKSNLK AARKVRIICH DPEATDSSSD EDEEYFDRCN  60
RWKQFIREIT LPVFPSKSIL EGPSQDKTGV CKSNISTSNS LDNIRPRRSS TIYKGVRRRP  120
WGKYSAEIRD PFLKIRLWLG TYTTAEEAAA AYKKKKEEFD KKMALERANN LHVDTKVVSE  180
EFDGLCSHPS PLSVLDVSTM TSLGHGLESN VEMVAKECNM ESSIKDESCV EMIEDGILDL  240
WEERTLSPSV SQELLGFDQQ CQMGQFFNGF INGEDFCMCD NTEPVSSPMD GVMDLPDIEL  300
ETLAFVDETL NFAHQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12033KKPAMKSNLKAARK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2130170.0AC213017.1 Populus trichocarpa clone POP051-F14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011013959.10.0PREDICTED: ethylene-responsive transcription factor ERF073-like
TrEMBLA0A2K1XID20.0A0A2K1XID2_POPTR; Uncharacterized protein
STRINGPOPTR_0015s06470.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.23e-14ERF family protein