PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG009847.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

G2-like

Protein Properties

Length: 185aa MW: 20690.5 Da PI: 4.5225

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG009847.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.3	1.2e-11	160	184	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LH++Fv+av++LGG++ CCG009847.1 160 KPRLRWTRDLHSCFVNAVKELGGPQ 184 79*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.0E-9	158	184	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence Send to blast
MSDRKGGHDD DREDTFLGGE MGGVSMEGHH FLDGFDREND GRSGFLEFGY GYPNHQYFEL 60 KLPHDDTQLG HLSPLGDSDE NDDPFLELQE TLAAPTLHHV PQNGTYHPAV VSSNEEVGGV 120 VVEKEEENNK EGLEQQPPSL PPPPQQLHNH LRISFTSDLK PRLRWTRDLH SCFVNAVKEL 180 GGPQS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011008189.1	1e-132	PREDICTED: uncharacterized protein LOC105113636 isoform X1
Refseq	XP_011008190.1	1e-132	PREDICTED: uncharacterized protein LOC105113636 isoform X2
TrEMBL	A0A3N7FZ88	7e-97	A0A3N7FZ88_POPTR; Uncharacterized protein
STRING	POPTR_0014s17030.1	4e-97	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18800	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G06020.1	5e-10	G2-like family protein