PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010133.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 187aa    MW: 20767.3 Da    PI: 4.5826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010133.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.6e-171565155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+G+r++k +g Wv+eIr+p   g+++r++lg++  +e+Aa a++ a++ l+g
  CCG010133.1 15 PRYRGIRQRK-WGTWVSEIREP---GQKTRIWLGSYEKPEMAAVAYDVAALHLRG 65
                 68*******9.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-101565IPR001471AP2/ERF domain
CDDcd000189.41E-291574No hitNo description
SuperFamilySSF541714.38E-201673IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.8E-301674IPR001471AP2/ERF domain
PROSITE profilePS5103222.1281673IPR001471AP2/ERF domain
SMARTSM003805.9E-341679IPR001471AP2/ERF domain
PRINTSPR003676.0E-121728IPR001471AP2/ERF domain
PRINTSPR003676.0E-125575IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MEGRSRDAHA EISTPRYRGI RQRKWGTWVS EIREPGQKTR IWLGSYEKPE MAAVAYDVAA  60
LHLRGRGAQL NFPEMQDSLP RPASSRAEDV QAAAREAALL FSGPVKCSDI VSCGSITSDG  120
GFGPVRVGLS PSQIQAINEA PLDSPKMWTE YLAETLLTGD PMAMENDIDV GYSEWEEIQQ  180
ESIWGYY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-151778668ATERF1
3gcc_A2e-151778668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011001613.11e-136PREDICTED: ethylene-responsive transcription factor ERF022-like
SwissprotQ9C9I24e-48ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLB9GX151e-127B9GX15_POPTR; Uncharacterized protein
STRINGPOPTR_0003s05300.11e-128(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-46ERF family protein