PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG012756.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family NAC
Protein Properties Length: 76aa    MW: 8847.97 Da    PI: 4.2096
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG012756.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.41.3e-101260251
          NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkv 51
                 ppG+ F Ptd el ++yL +kv+g +l+   +ik++++y ++ePw++ +++
  CCG012756.1 12 PPGYSFCPTDVELACFYLYRKVNGLQLPD--TIKDCNLYgDHEPWEIWEAF 60
                 89************************877..7*****994579***96433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-11661IPR003441NAC domain
PROSITE profilePS5100511.0981176IPR003441NAC domain
PfamPF023654.0E-61260IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MQGEHVSSIE PPPGYSFCPT DVELACFYLY RKVNGLQLPD TIKDCNLYGD HEPWEIWEAF  60
EGSEFLTRRV FSFLLN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002313991.25e-38NAC domain-containing protein 71
TrEMBLA0A2K1Z4791e-36A0A2K1Z479_POPTR; Uncharacterized protein
STRINGPOPTR_0009s07640.16e-37(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-09NAC-domain protein 101