PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG015765.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family GeBP
Protein Properties Length: 134aa    MW: 15771.2 Da    PI: 9.7123
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG015765.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57364.72.2e-20185397
       DUF573  3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                 f+rlwseeDe++lL+G+  fk k g       +af+e++k+ i+f+vsk+ql +Ki + K+ f++++k     +  +f ++h qki++lsk iW+
  CCG015765.1  1 FKRLWSEEDEVALLKGIKIFK-KVGI-----PEAFFEYIKDDIHFDVSKKQLNSKISKHKREFEENMKA----NRCTFGNSHKQKIYDLSKLIWD 85
                 79**************99994.4453.....479**********************************9....999******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.3E-18185IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
FKRLWSEEDE VALLKGIKIF KKVGIPEAFF EYIKDDIHFD VSKKQLNSKI SKHKREFEEN  60
MKANRCTFGN SHKQKIYDLS KLIWDVKVKG STEVIAKELK ASDSDEGITK KLKVLESYFE  120
TEDKETKIKK YFIS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002518574.14e-17GLABROUS1 enhancer-binding protein-like
TrEMBLA0A1Q3BTE55e-17A0A1Q3BTE5_CEPFO; DUF573 domain-containing protein
STRINGXP_002518574.12e-16(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-13DNA-binding storekeeper protein-related transcriptional regulator