PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG017765.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 98aa    MW: 11105.8 Da    PI: 12.3471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG017765.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.94.4e-072953225
          AP2  2 gykGVrwdkkrgrWvAeIrd.pse.n 25
                 +++GVr ++ +gr++Ae rd +++ +
  CCG017765.1 29 HFRGVRKRP-WGRFAAETRDpWKKtR 53
                 69*******.**********886643 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-82857IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-52957IPR016177DNA-binding domain
PROSITE profilePS510329.5592956IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MAVTTTLSLA GSSAPSSLAV QAKNEPQRHF RGVRKRPWGR FAAETRDPWK KTRRRLDTCL  60
RRGSSISPWA KGKDKLLPQR SFCSRAIFAN CGGWRRSF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028745.13e-19PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLB9H8I36e-16B9H8I3_POPTR; Uncharacterized protein
STRINGPOPTR_0005s24110.19e-17(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-11ERF domain protein 12