PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG018256.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family WRKY
Protein Properties Length: 1016aa    MW: 112514 Da    PI: 9.8117
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG018256.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83.1e-30221279259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeH+h+
  CCG018256.1 221 ADEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAVDDPAMLIVTYEGEHRHS 279
                  69*************************988****************************7 PP
2WRKY46.57.5e-152983362259
                  EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++YY+C+s  gCp++k+ver+ +dp ++++tYegeH+h+
  CCG018256.1 298 QGYYKCSSVrGCPARKHVERAVDDPAMLIVTYEGEHRHS 336
                  58*****988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.2E-17173218IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.807.5E-32208279IPR003657WRKY domain
PROSITE profilePS5081129.746215281IPR003657WRKY domain
SuperFamilySSF1182903.01E-25218280IPR003657WRKY domain
SMARTSM007746.7E-37220280IPR003657WRKY domain
PfamPF031061.6E-25222278IPR003657WRKY domain
SMARTSM007743.4E-9286337IPR003657WRKY domain
SuperFamilySSF1182901.7E-11298337IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.0E-15298336IPR003657WRKY domain
PfamPF031066.8E-12298335IPR003657WRKY domain
PROSITE profilePS5081117.029298338IPR003657WRKY domain
Gene3DG3DSA:3.30.200.207.5E-24426521No hitNo description
SuperFamilySSF561122.08E-61432710IPR011009Protein kinase-like domain
PROSITE profilePS5001126.308451718IPR000719Protein kinase domain
PfamPF077141.2E-20456599IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
PROSITE patternPS001070457488IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.102.4E-28522708No hitNo description
PROSITE patternPS001080579591IPR008271Serine/threonine-protein kinase, active site
PfamPF077147.8E-9600708IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3DG3DSA:3.30.200.203.7E-11794866No hitNo description
SuperFamilySSF561122.66E-288021006IPR011009Protein kinase-like domain
PROSITE patternPS001070825856IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.103.0E-188711009No hitNo description
PfamPF000695.2E-98731003IPR000719Protein kinase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1016 aa     Download sequence    Send to blast
MAVDLVGYSK MEDQMAIQEA ASAGIKSMEH LICALSNQTQ QSHQLDCREI TSFTVAKFKQ  60
VISILNRTGH ARFRRGPTSS NPVSVRPVVQ EPQKLNLDFF KSNNTFKAET KNDLSFGSQY  120
SKDCFSSGTT TSSFLSSVTA DGSVSDGKQG GSSSLFGTHP RPTGKPPLSS THRKKCHDHT  180
LSTSKISSSG GSCHCSKRRK SRVKRTIRVP AISSKVADIP ADEFSWRKYG QKPIKGSPYP  240
RGYYKCSSVR GCPARKHVER AVDDPAMLIV TYEGEHRHSH APLPENVTAN AAIRHVFQGY  300
YKCSSVRGCP ARKHVERAVD DPAMLIVTYE GEHRHSHAPL PENVTANAAI RHKPATTQDQ  360
DPTPSTADHV SAGSDDFGNS WFSRVSTSIT TWMSQPSSSF TTIWDKNVPE SSQFSDATGS  420
GDGTMANGQN ATSSSMRVFT LAQLRAATYN FRSDMLLGKG GFGTVYKGWL KEKLPPSGIK  480
KTVVAVKKLD TFSMQGLNEW KAEVYFSEKH SHPNLQELLG YCLESGDRIL VYEFMKKRSL  540
NYHLFGKRSF PPLSWDIRLK IAIDTARGLA YLHTLEEPII YRDFKSSNIL LDEASFYEAC  600
TIGYIDPEYL AAGHLHVKSD VYGFGVVMVE MLTGLRAIDM KRPSGKQILV DWAKPYLTNR  660
SKLKNIMDSR LKGKFPPKEA YQIAHLAIKC LQHDPRFRPS MTEIAETLEQ IDAIHMRLAH  720
KPATTQDQDP TPSTAGHISA GSDDFGNGWF SIASTSITTW MSHPSSSFTT IWGKNVPESS  780
QFSDATGSGD VTLANGQNAT SSTVTVFTLA QLRAATYNFR SDMVLGKGGF GDVYKGWVKE  840
KLPPRGIKKT AVAIKKLDSF SMHGLKEWKF YNAKLSDFGL SFWGPLIDSH VSTRIAGTMG  900
YIDPEYLATG HLHVKSDVNG FGVVVVEMLT GLRAIEKKRL SGKQILVDWV KPYLTNRSKL  960
KKIMDSRSEG KYPPKEASQI APLAFKCLQH APRFRPSMTE IAETLEQIDA IHMRLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_A3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5t_D3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5t_I3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5t_J3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5t_M3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5u_C3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j5v_C3e-81428101163385Probable serine/threonine-protein kinase PBL2
6j6i_A3e-81428101163385Probable serine/threonine-protein kinase PBL2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in plant defense signaling. {ECO:0000250|UniProtKB:O48814}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011017714.10.0PREDICTED: probable serine/threonine-protein kinase NAK
SwissprotQ9SII61e-103PIX13_ARATH; Probable serine/threonine-protein kinase PIX13
TrEMBLA0A3N7G7I40.0A0A3N7G7I4_POPTR; Uncharacterized protein
STRINGPOPTR_0018s13580.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-88WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Stael S,Bayer RG,Mehlmer N,Teige M
    Protein N-acylation overrides differing targeting signals.
    FEBS Lett., 2011. 585(3): p. 517-522
    [PMID:21219905]
  2. Qi X,Chanderbali AS,Wong GK,Soltis DE,Soltis PS
    Phylogeny and evolutionary history of glycogen synthase kinase 3/SHAGGY-like kinase genes in land plants.
    BMC Evol. Biol., 2013. 13: p. 143
    [PMID:23834366]
  3. Guy E, et al.
    xopAC-triggered immunity against Xanthomonas depends on Arabidopsis receptor-like cytoplasmic kinase genes PBL2 and RIPK.
    PLoS ONE, 2013. 8(8): p. e73469
    [PMID:23951354]