PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG019352.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 186aa MW: 21847.3 Da PI: 10.3874

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG019352.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.4	7.1e-09	71	105	3	37
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvke 37 ++kr +r ++ R++A+rsR+RK+ ++e+Le+ vk+ CCG019352.1 71 KSKRIKRIMSSRLSAQRSRLRKLVYVEKLERDVKA 105 68*****************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	1.9E-7	71	105	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.7E-7	73	105	No hit	No description
SuperFamily	SSF57959	5.06E-6	73	111	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence Send to blast
MLNSKRSHSA SYFDMEVLAP SLSNRRVDRD LDPRSNGTLG PVIPCSCTVT EQQKDTQCKR 60 RHDNALDSEL KSKRIKRIMS SRLSAQRSRL RKLVYVEKLE RDVKAEEVHD HPRFKYLTKM 120 QVKVYWLSLQ ASLYQPSQMA LKTENTHIKE IMKGLEREKA MKEVDFQYLK KELQTLRGAS 180 MRLLYN

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC216544	3e-66	AC216544.1 Populus trichocarpa clone POP016-D10, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	B9IGE5	1e-79	B9IGE5_POPTR; Uncharacterized protein
STRING	POPTR_0016s12930.1	2e-80	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF28220	3	3