PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG021658.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ZF-HD
Protein Properties Length: 86aa    MW: 9517.33 Da    PI: 8.9856
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG021658.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer48.22.5e-154385244
  ZF-HD_dimer  2 ekvrYkeClkNhAa.slGghavDGCgEfmpsegeegtaaalkCa 44
                 + +rYkeCl NhAa s+ g+a DGCgEf+p  +eeg  +alkC+
  CCG021658.1 43 KVMRYKECLENHAAtSICGKAKDGCGEFIPG-EEEGILEALKCS 85
                 5789********98579*************9.7789*******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257747.0E-94285IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.4E-124585IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152317.4024786IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    Send to blast
MFLLAGTRVA VAVAVEVFLS ILFPKKMDIP LQASRRIKRP YKKVMRYKEC LENHAATSIC  60
GKAKDGCGEF IPGEEEGILE ALKCST
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306012.23e-19zinc-finger homeodomain protein 3
TrEMBLB9GY331e-26B9GY33_POPTR; Uncharacterized protein
STRINGPOPTR_0004s14270.11e-18(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3952822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.15e-15homeobox protein 21