PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG025092.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 342aa    MW: 37971.2 Da    PI: 4.5701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG025092.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.5e-17122170254
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                  +  GVr++k +g+W+AeIr p++   ++r +lg+f+t eeAa+a++a ++++e
  CCG025092.1 122 KPVGVRQRK-WGKWAAEIRNPVT---KARTWLGTFDTLEEAAQAYEAKKQEYE 170
                  789*****9.**********654...5***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.42E-21121182No hitNo description
SMARTSM003807.7E-15122190IPR001471AP2/ERF domain
PfamPF008475.3E-12122171IPR001471AP2/ERF domain
PROSITE profilePS5103217.833122184IPR001471AP2/ERF domain
PRINTSPR003673.4E-7123134IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-15124169IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-19125166IPR001471AP2/ERF domain
PRINTSPR003673.4E-7145161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MPPKRQSLLY TKTGNKANDI KRILSRESKM ESTMRKIRVI CYDPYATESD SSDDESDKKS  60
SGKRFVREID LPLVVTPQPK TFEPESSCQD SNNSAKSPGK KMRVLPETPT STFEAKKLAP  120
KKPVGVRQRK WGKWAAEIRN PVTKARTWLG TFDTLEEAAQ AYEAKKQEYE ALAMLASEKS  180
QNISSSLATS QSHSHNSSKK QVSSASSGDT DDSVVSRTSP ASVLELDTST VSNVTGECGL  240
VIKYEDIGSS VANLEIPDLN FMNDPLASCP IDQDLNLGLD FGNLIDEFGR FYDDYCVIDD  300
LDICGLNGEE PGELPDYDFE FGNEEFTYLD DHQQKPLNIA CQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011007949.10.0PREDICTED: ethylene-responsive transcription factor ERF119
RefseqXP_011007956.10.0PREDICTED: ethylene-responsive transcription factor ERF119
TrEMBLB9HWI20.0B9HWI2_POPTR; Uncharacterized protein
STRINGPOPTR_0010s13540.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.25e-32ERF family protein