PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG026726.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

G2-like

Protein Properties

Length: 183aa MW: 20557.1 Da PI: 5.7125

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG026726.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.8	1.6e-30	89	142	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+ekAtPk + +lm+v L+++hvkSHLQ+YR+ CCG026726.1 89 PRLRWTPDLHLSFVHAVERLGGQEKATPKLVFQLMNVRELSIAHVKSHLQRYRS 142 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.4E-28	85	143	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.351	85	145	IPR017930	Myb domain
SuperFamily	SSF46689	1.79E-14	87	143	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.2E-22	89	144	IPR006447	Myb domain, plants
Pfam	PF00249	4.3E-7	90	141	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence Send to blast
MEEGLEILDQ EKIDGWEGQA ENIFLLSSQK CSSYDLNEEA TSAEDNGTAE ASNTDGDKRT 60 EGNSANNATS AERNGLRPTV RQYVRSKVPR LRWTPDLHLS FVHAVERLGG QEKATPKLVF 120 QLMNVRELSI AHVKSHLQRY RSKKLDEAGQ GDIFFLTLVF SLVRGLGPVL SINFILMKDE 180 KSY

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-17	90	144	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011039440.1	1e-104	PREDICTED: uncharacterized protein LOC105136003
TrEMBL	A0A3N7FSF9	5e-97	A0A3N7FSF9_POPTR; Uncharacterized protein
STRING	POPTR_0011s07270.1	1e-102	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3012	32	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-37	G2-like family protein