PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG028390.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family G2-like
Protein Properties Length: 160aa    MW: 18023.7 Da    PI: 4.6606
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG028390.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like36.61e-11135159125
      G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                  kprlrWt +LH++Fv+av++LGG++
  CCG028390.1 135 KPRLRWTRDLHSCFVNAVKELGGPQ 159
                  79*********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.2E-9133159IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-7135159IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MEGHHFLDGF DRENDGRSGF LEFGYGYPNH QYFELKLPHD DTQLGHLSPL GDSDENDDPF  60
LELQETLAAP TPHHVPQNGT YHPAVVSSNE EVGGVVVEKE EENNKEGLEQ QPPSLPPPPQ  120
QLHNHLRISF TSDLKPRLRW TRDLHSCFVN AVKELGGPQS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011008189.11e-113PREDICTED: uncharacterized protein LOC105113636 isoform X1
RefseqXP_011008190.11e-113PREDICTED: uncharacterized protein LOC105113636 isoform X2
TrEMBLA0A3N7FZ882e-80A0A3N7FZ88_POPTR; Uncharacterized protein
STRINGPOPTR_0014s17030.15e-81(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1880056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G06020.13e-10G2-like family protein