PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG031601.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 437aa    MW: 49431.7 Da    PI: 8.0496
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG031601.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.9e-20255304255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa a+++a++k++g
  CCG031601.1 255 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAVAYDKAALKFKG 304
                  7********.**********94....45************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.2E-33254313IPR001471AP2/ERF domain
SMARTSM003804.3E-39255318IPR001471AP2/ERF domain
PROSITE profilePS5103224.856255312IPR001471AP2/ERF domain
PfamPF008472.6E-12255304IPR001471AP2/ERF domain
CDDcd000186.42E-34255313No hitNo description
SuperFamilySSF541712.42E-22255313IPR016177DNA-binding domain
PRINTSPR003672.4E-11256267IPR001471AP2/ERF domain
PRINTSPR003672.4E-11278294IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MFRVVEKRGF DQAIDLSLEI LSNVKYVLET RLIGKSWKKS FRMFVYGLED PVKGLGIWED  60
FIGYKPFFLE NPLFSEKLPS PLLLVYINER ATFVTASALD MQSSNFKNCF DSVDPGSLHC  120
GRARFDFAHV LIRSYKSSEA TALISCPRII IPKPKNLVYI NYFLKVDRRH GKRPLPLEAS  180
EEKEKEHDEF PSYASTWSET DMSAMVSALT QVMGTTDNNP TSVQSTPYAL EQSVVKDEPD  240
QSQPVQDQEN TRRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFDTAED AAVAYDKAAL  300
KFKGTKAKLN FPERVQGKTE FGYFMGSGAS SNFLTEQSPR PVAPPPPPPP PPPPPPSSFA  360
PDTYPDLLQY AQILSSNDAN FPYYTSNLFN QQPFAPHFSS SFLSQQQQDL LRFSSRFDSS  420
SSSDQQKHGK DSSNPSE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-26254315466ATERF1
3gcc_A3e-26254315466ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020891.11e-170PREDICTED: ethylene-responsive transcription factor ERF113-like
TrEMBLB9GZ211e-119B9GZ21_POPTR; Uncharacterized protein
STRINGPOPTR_0001s12990.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.14e-42related to AP2 6l