PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG032568.3
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 259aa    MW: 29109.3 Da    PI: 4.7576
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG032568.3genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.83e-143179455
          AP2  4 kGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 k V++++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  CCG032568.3 31 KSVCRHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 79
                 88*************99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.0022987IPR001471AP2/ERF domain
PfamPF008471.4E-103079IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-153389IPR016177DNA-binding domain
SMARTSM003803.7E-203593IPR001471AP2/ERF domain
CDDcd000183.86E-213589No hitNo description
Gene3DG3DSA:3.30.730.103.5E-153588IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MYEYFHALIK SMFKSMLSCT DGDIFHIQNP KSVCRHHHNG RWEARIGRVF GNKYLYLGTY  60
ATQEEAATAY DMAAIEYRGI NAVTNFDLSR YIKWLRPSSQ NNVNNHQQNP NGDANPIQNL  120
DQKIELDFMP HQQSSSVNEM EELTDPARSG GTGGSASSAL GLLLQSSKFK EILERTSASD  180
CPLTPPPLTP PESERDPPRR SFPDDIQTFF DCQDSSGYPD GDDINIFGEL NPFASPIFHY  240
ELDGQEMVFG ANKSNILTI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011034594.11e-170PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A2K2BS441e-114A0A2K2BS44_POPTR; Uncharacterized protein
STRINGPOPTR_0001s03300.11e-115(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.22e-22ARIA-interacting double AP2 domain protein