PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG033276.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

G2-like

Protein Properties

Length: 133aa MW: 15279.4 Da PI: 10.3791

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG033276.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.4e-31	61	115	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWt++LH+rFve v++LGG+ekAtPk il+ m+v+gLt+ hvkSHLQkYR+ CCG033276.1 61 KIRVRWTQDLHKRFVESVNRLGGAEKATPKGILREMDVHGLTILHVKSHLQKYRT 115 569***************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.904	58	118	IPR017930	Myb domain
SuperFamily	SSF46689	1.36E-16	59	115	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.5E-28	60	116	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-24	61	115	IPR006447	Myb domain, plants
Pfam	PF00249	2.6E-8	63	114	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence Send to blast
MHVDNRFKDH QNHEVAYQPF TSQVTKPTSH FQPQMQPAYS PYDMTSGANN SVSLGATIKS 60 KIRVRWTQDL HKRFVESVNR LGGAEKATPK GILREMDVHG LTILHVKSHL QKYRTARYLP 120 ESKEGIKLYF VIS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	5e-25	61	118	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-25	61	118	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-25	61	118	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-25	61	118	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	7e-25	60	118	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006369451.2	6e-86	myb family transcription factor PHL5 isoform X3
Refseq	XP_024448738.1	5e-85	myb family transcription factor PHL5 isoform X1
Refseq	XP_024448741.1	5e-85	myb family transcription factor PHL5 isoform X2
Swissprot	Q0WVU3	2e-31	PHL5_ARATH; Myb family transcription factor PHL5
TrEMBL	A0A3N7EBF7	1e-84	A0A3N7EBF7_POPTR; Uncharacterized protein
TrEMBL	A0A3N7EDN9	1e-83	A0A3N7EDN9_POPTR; Uncharacterized protein
TrEMBL	A0A3N7FU15	1e-83	A0A3N7FU15_POPTR; Uncharacterized protein
STRING	POPTR_0001s23560.1	3e-87	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17875	5	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	3e-34	G2-like family protein