PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cagra.5864s0003.1.p
Organism
Capsella grandiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
Family EIL
Protein Properties Length: 525aa    MW: 59581 Da    PI: 6.5085
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cagra.5864s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3383.82.6e-117494121354
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          eel+kr w+d+++lk l+e+ k+ ++++   ++++  ++  +++++++m +aQDgiLkYM k+m  c+aqGfvYgi+ e+gk+v g+sd+
  Cagra.5864s0003.1.p  49 EELEKRIWRDKQRLKYLREMAKSGVGKR---FSNQLDDEFLQHSSKRTMYKAQDGILKYMSKTMDRCKAQGFVYGIVLENGKTVAGSSDN 135
                          8*********************987443...56777889*************************************************** PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          Lr+WWk+kv+fdrngpaai+k+ ++ + ++ ++  +  ++s+ h+l elqDTtlg+LLsalm  c+ppqrrfpl+kgv+pPWWPtGke+w
  Cagra.5864s0003.1.p 136 LREWWKDKVRFDRNGPAAITKHHKDSNPFDASEIGSEVGESTAHKLLELQDTTLGALLSALMPNCKPPQRRFPLDKGVTPPWWPTGKEDW 225
                          **********************7777766666655556**************************************************** PP

                          HHHHT--TT--...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX CS
                 EIN3 181 wgelglskdqg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss 265
                          w++l+l+ d +  +ppykkphdlkk wkv+vL avi+hm+ +i++i +l+r+s++lq+km+++e + +l+ lnqe++ +++++ +   s 
  Cagra.5864s0003.1.p 226 WSQLSLPDDCRglPPPYKKPHDLKKLWKVGVLIAVIRHMASDISNIPNLVRRSRSLQEKMTSREGALWLAALNQEKAVVDQMHHSltfST 315
                          **********************************************************************************99966522 PP

                          .........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXX CS
                 EIN3 266 .........slrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadk 346
                                      +++ +v + +++++dveg   s+  + q  +  +++++v krk + +  ++++ + +  tc+++ +++s+++++f d+
  Cagra.5864s0003.1.p 316 ennnncnfpVPGTGDADVLFPESANYDVEGIGGSHRFSPQYPEVDNTYTCVYKRKFEGDLGMSMH-QPTLLTCENNLCPYSQPHMGFYDR 404
                          66677766533449999************888888888999999999********7666666665.5578******************** PP

                          XXXXXXXX CS
                 EIN3 347 nsisqney 354
                          n ++++++
  Cagra.5864s0003.1.p 405 NLRENHQM 412
                          ******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.5E-11149301No hitNo description
Gene3DG3DSA:1.10.3180.109.5E-62173310IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.26E-53178304IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MDMYNNNRGL FRGLVCSPVV PPFSEGDACS DAHTALFNDM SSDEEMDIEE LEKRIWRDKQ  60
RLKYLREMAK SGVGKRFSNQ LDDEFLQHSS KRTMYKAQDG ILKYMSKTMD RCKAQGFVYG  120
IVLENGKTVA GSSDNLREWW KDKVRFDRNG PAAITKHHKD SNPFDASEIG SEVGESTAHK  180
LLELQDTTLG ALLSALMPNC KPPQRRFPLD KGVTPPWWPT GKEDWWSQLS LPDDCRGLPP  240
PYKKPHDLKK LWKVGVLIAV IRHMASDISN IPNLVRRSRS LQEKMTSREG ALWLAALNQE  300
KAVVDQMHHS LTFSTENNNN CNFPVPGTGD ADVLFPESAN YDVEGIGGSH RFSPQYPEVD  360
NTYTCVYKRK FEGDLGMSMH QPTLLTCENN LCPYSQPHMG FYDRNLRENH QMNCPYKVTS  420
FYQPAKHYGM SGLMAPCPDY NRMQQQVQSI QDQFNPPNNP YRPKAEQRGD SYNDLIDDQS  480
PSPSMVNHNP GLVLPNDFSD HAETVGMENN LQNQGQGLPT SWMQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A8e-551763081131Protein ETHYLENE INSENSITIVE 3
4zds_B8e-551763081131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapCagra.5864s0003.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006287498.10.0ETHYLENE INSENSITIVE 3-like 2 protein
SwissprotO231150.0EIL2_ARATH; ETHYLENE INSENSITIVE 3-like 2 protein
TrEMBLR0FER20.0R0FER2_9BRAS; Uncharacterized protein
STRINGCagra.5864s0003.1.p0.0(Capsella grandiflora)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM147191621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21120.10.0ETHYLENE-INSENSITIVE3-like 2