PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cc07_g09100
Common NameGSCOC_T00040306001
Organism
Coffea canephora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
Family BES1
Protein Properties Length: 318aa    MW: 33715.7 Da    PI: 9.0567
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cc07_g09100genomeCGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.27.7e-6791532150
       DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                  +sgr ptwkErEnnkrRERrRRaiaaki+aGLRaqGnyklpk++DnneVlkALc eAGw+vedDGttyrkg kp+   e +g+sas+s +ss+q s+ 
  Cc07_g09100   9 SSGRLPTWKERENNKRRERRRRAIAAKIFAGLRAQGNYKLPKHCDNNEVLKALCSEAGWIVEDDGTTYRKGGKPP-LVELTGASASISACSSIQPSPA 105
                  89*************************************************************************.9********************* PP

       DUF822 100 ssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                  ss+++sp++sy+asp sssfpsps+ d+++    + +lp+l++l+++++sl
  Cc07_g09100 106 SSSFPSPAPSYHASPGSSSFPSPSRGDTNPP---SYILPFLHNLASIPNSL 153
                  ****************************987...599*****999998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-629133IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTAAGGGSSS GRLPTWKERE NNKRRERRRR AIAAKIFAGL RAQGNYKLPK HCDNNEVLKA  60
LCSEAGWIVE DDGTTYRKGG KPPLVELTGA SASISACSSI QPSPASSSFP SPAPSYHASP  120
GSSSFPSPSR GDTNPPSYIL PFLHNLASIP NSLPPLRISN SAPVTPPLSS PTRGSKRKPD  180
WEPLSHIKLP PSLPHSLFAA SAPASPTRRQ HFTPATIPEC DESDISPVES ARWVSFQTAP  240
AAPSSPTFNL VKPATLQNHQ DVVDGRGQFP WGAGAQRGCG SEFAFESCTV KAWEGERAHE  300
IGVDDLELTL GSGKAHG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-241292372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-241292372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-241292372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-241292372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027074039.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-103BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A068U2N40.0A0A068U2N4_COFCA; Uncharacterized protein
STRINGXP_009765795.11e-132(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94862128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.33e-79BES1 family protein