PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cc09_g08060

Common Name

GSCOC_T00003804001

Organism

Coffea canephora

Taxonomic ID

49390

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea

Family

BES1

Protein Properties

Length: 223aa MW: 23601.1 Da PI: 10.2649

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cc09_g08060	genome	CGSC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	118.5	9.8e-37	17	115	1	97
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.....aspess 93 gg+g ++++ E+E++k+RER+RR i++ki+ GLR++G+y+l raD+n+Vl+ L++eAGw+ve+DGttyr +s+ ++ +s+ +s++ss Cc09_g08060 17 GGGGSMRSAVEKERTKLRERQRRSITTKIFHGLRKHGGYPLSPRADINQVLRHLAQEAGWIVEPDGTTYRSSSSAS---TITTTSNVcplcgNSKKSS 111 57899999**************************************************************777766...3333333310011333333 PP DUF822 94 lqss 97 s Cc09_g08060 112 FVGS 115 3211 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.2E-33	19	128	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence Send to blast
MKEAGGAGDQ RSSSGGGGGG SMRSAVEKER TKLRERQRRS ITTKIFHGLR KHGGYPLSPR 60 ADINQVLRHL AQEAGWIVEP DGTTYRSSSS ASTITTTSNV CPLCGNSKKS SFVGSATIGE 120 CSTTASPSRL TTAGDSISQP TTTTTDIYRD HMHHSLVATY MYGGGGERGG RAHYMTAAAG 180 ENKLGQGQVA AAWSPSTYME VQWMEARASN QNTPAGSPRR RT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027086506.1	1e-163	beta-amylase 7-like
TrEMBL	A0A068V9J3	1e-161	A0A068V9J3_COFCA; Uncharacterized protein
STRING	Migut.M01888.1.p	3e-51	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15594	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	3e-19	beta-amylase 7