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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Ciclev10000671m |
| Common Name | CICLE_v10000671mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GRAS |
| Protein Properties |
Length: 588aa MW: 65606.3 Da PI: 4.7719 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10000671m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 447.8 | 7.1e-137 | 217 | 587 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
l++lL++cA +s+g+ e+a++++++l++++s +gdp qR+aay++e+Laar+a s++ lykal+++e + ss++laa+++++ev+P++kf+
Ciclev10000671m 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPP---SSDRLAAMQILFEVCPCFKFG 307
689******************************************************************9...9******************** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
+++aN aI ea++ge+rvHiiDfdi+qG Q+++L+q++as p++ p+lR+Tgv++pes+ l+ +g rL+++Ae+lgvpfef++ v +++
Ciclev10000671m 308 FMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVqrLVGGLQIIGLRLESLAEALGVPFEFHA-VPSKT 400
*********************************************************99666789***********************.7**** PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
+ +++++L+++pgEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++F+ rf+ea +yys++f+sl+a+lpres+
Ciclev10000671m 401 SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQ 494
********************************************************************************************** PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+r++vEr++l+r+ivn++aceg+er+er e ++kWr+r+++aGF++ p+s ++++ ++ l++++ ++ y+++ee g l +gW+d++L+++SaW+
Ciclev10000671m 495 DRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR-YKLKEELGLLHFGWEDKSLIVASAWK 587
****************************************************************966.*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 588 aa
Download sequence Send
to blast |
MSLVSSPEPS ATSYRKTKLY TLKGSGHSSA LSTQAFGSDK HKMMCQTDSY SSENYEDYIL 60
DSPTEELIHP SSSADSGNSF QRQGAPSHQL RAGSSFPMAA QSPLDSSFMS MRRCHGYQPS 120
FESGYLENQC PDPVDYDEDT MRLKLQELER ALLDDTVGDE DDDMFTTIQN MEVEGEWPEP 180
VQNVPFHDSP KESSSSDSIL SSISSNKEVS QLSPRTLKQL LIDCAATLSD GNIEEATTII 240
NELRQMVSIQ GDPPQRIAAY MVEGLAARMA ASGKFLYKAL KCKEPPSSDR LAAMQILFEV 300
CPCFKFGFMA ANGAIIEAFK GEKRVHIIDF DINQGSQYIT LIQTIASLPG NRPHLRLTGV 360
DDPESVQRLV GGLQIIGLRL ESLAEALGVP FEFHAVPSKT SLVTPSMLEC RPGEALVVNF 420
AFQLHHMPDE SVSTVNQRDQ LLRMVKSLNP KLVTVVEQDM NTNTSPFFPR FIEAYNYYSV 480
VFESLDATLP RESQDRMNVE RQCLARDIVN IIACEGEERI ERYELAGKWR ARMTMAGFTS 540
CPMSADVTDM IRKLIKQYCD RYKLKEELGL LHFGWEDKSL IVASAWK*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
