PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10003845m
Common NameCICLE_v10003845mg
Organism
Citrus clementina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 185aa    MW: 20434.9 Da    PI: 8.1731
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10003845mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.81.1e-08151173426
                      XCHHHCHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                      ++r +r++kNRe+A rsR+RK++
  Ciclev10003845m 151 DRRHKRMMKNRESAARSRARKQE 173
                      789*******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147071.24E-13152173No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-5152173No hitNo description
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MEEVWQDISL TSLQDHANTA IPNTTGIPNT SAALIFQDFF ARPFNKDPPI TKASPAAHPS  60
TAEPSNSSCF GNLAPHHGGA LLSLNSGSGF NYLENVPAPL AHHHQRPSHQ LLQGFPLNNC  120
NSPFDDALAP AHVVSSICFK RPQEHEGHLT DRRHKRMMKN RESAARSRAR KQEPHFLFFP  180
PLFY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006435229.21e-125bZIP transcription factor 27
TrEMBLV4V8I41e-133V4V8I4_9ROSI; Uncharacterized protein
STRINGXP_006435229.11e-134(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.18e-13bZIP family protein