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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Ciclev10006534m |
| Common Name | CICLE_v10006534mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GRAS |
| Protein Properties |
Length: 431aa MW: 48492.9 Da PI: 6.4029 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10006534m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 260.6 | 5.4e-80 | 55 | 426 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn....sseelaalkl...fse 86
lv+lLl Ae + s+++ +a+ +L ++ + +s +g+p+qRl++yf +AL++r + ++ ++ ++ +++e ++ ++a ++ ++
Ciclev10006534m 55 LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGlKSEEVM--LllhpEEVMASAKQAliaCYQ 146
689**************************************************995555554441444433..134443333333333445899 PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
P+++++ ++ qa+ e v++++++HiiD+ G + pa++qaLa+R++ pp l+iT v+ +++sk++ ee+++rLa+fAe++++pf fn
Ciclev10006534m 147 KVPFYQVTVFAGIQAVIENVSSAKTIHIIDLATRTGSHCPAIMQALATRQGCPPeLLKITMVVG-TTSSKQKFEEIENRLANFAETINLPFPFN 239
9*************************************************8888689****999.667************************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
+ +++++++++gE++aV + ++l ++ +++ +le +L +++++P v+vv+e e++ n ++F +rf+ +l ++ alfd+le+
Ciclev10006534m 240 I-----SFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLET----FLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEV 324
9.....234567999********************99999998....*********************************************** PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
+ r + +r++ E+++ g++i+n++a eg+er+ h + Wr+ ++++G+ +++ls+ qa+l+lr ++ + +++ + ++l++gWk+ p
Ciclev10006534m 325 CMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFAcGSSCTIDRNGECLIIGWKGIP 418
************************************************************************9999****************** PP
GRAS 367 LvsvSaWr 374
+s+S+W+
Ciclev10006534m 419 HLSLSVWK 426
*******8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 431 aa
Download sequence Send
to blast |
MAGLGELSLV DIIRAAITRY LQFSLHGRPD LFCLDHFCGN SPTGFPEGGI KGVELVHLLL 60 LSAEKIGSQQ FDRASIFLDH VDKYSSTTGN PVQRLVHYFS KALRERFNLE TGRITSKGLK 120 SEEVMLLLHP EEVMASAKQA LIACYQKVPF YQVTVFAGIQ AVIENVSSAK TIHIIDLATR 180 TGSHCPAIMQ ALATRQGCPP ELLKITMVVG TTSSKQKFEE IENRLANFAE TINLPFPFNI 240 SFLTDIKDFE TNEGEVVAVY SPVHLSHMIR KPNCLETFLT ELRKINPCVM VVIEVESNDN 300 LQTFEDRFFG TLFHFGALFD CLEVCMNRCH ANRMTFEEMY AGQHIRNIIA SEGEERIFGH 360 MKIDGWRDLF NRFGLVEAEL SSWSLFQAEL ILRSFACGSS CTIDRNGECL IIGWKGIPHL 420 SLSVWKFHRE *
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