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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10006766m |
| Common Name | CICLE_v10006766mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
GRAS |
| Protein Properties |
Length: 438aa MW: 49818.5 Da PI: 8.4083 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10006766m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 279.4 | 1.1e-85 | 55 | 424 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl....fsevsP 89
lv+lL+ cAe + s+++ +a++lL + ++ +s+ g++++R+++yf++AL++r +r +++ ++k ++ +e + + +e++ +l+ ++ s
Ciclev10006766m 55 LVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNReTGKITSKRVKGEEIKLLQPEETILSLRPalvaCYKESS 148
689****************************************************444555555666666655555555555434556566677 PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
+++ + ++ qaI e v++++r+H iD+ i G + + L+qaLa+R+e p l+iT+vgs +sk+++eetg+rLa fAe+ ++pf+f++++
Ciclev10006766m 149 FYQATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCMVLMQALATRQECPVkLLKITAVGS---SSKQRMEETGKRLAYFAETWNLPFSFKIVM 239
9999*******************************************7665499*******...58**************************** PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
+++++dl+ ++++++ gEa+aV + + l r+ + d ++k+++++sP v+v++e ea+hns++F +rf+e l +ysa fd+l+++++
Ciclev10006766m 240 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTR--------HPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMA 325
**************************888886........457899************************************************ PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvs 369
r + er++ E+++lg++i+n++a+eg+er+ rh + Wr+ ++++G+ +++ls++ qa+l++++++ +++ + ++l+ gWk+ p +s
Ciclev10006766m 326 RCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAfASYLTLDRNGQCLIVGWKGSPQLS 419
*********************************************************************555568888899999********** PP
GRAS 370 vSaWr 374
+S+W+
Ciclev10006766m 420 LSVWK 424
****8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MAGFRELSTV DVIRAATAIY LQSSSHSSSN LSLLYHFCGG SAINISEEES KDVELVHLLI 60 LCAEKIGSQQ FDRASTLLDH CENFSSKIGN SVERVVHYFV KALQERFNRE TGKITSKRVK 120 GEEIKLLQPE ETILSLRPAL VACYKESSFY QATLFAGTQA IIERVASAKR IHLIDLAIRS 180 GSHCMVLMQA LATRQECPVK LLKITAVGSS SKQRMEETGK RLAYFAETWN LPFSFKIVMV 240 TETKDLNEDK FDLNAGEAVA VYSPILLSRT RHPDFLIKML RKISPCVMVI IEVEANHNSQ 300 NFEDRFFEVL FHYSASFDCL KVSMARCDPE RVTFEEMYLG QHIRNIIATE GEERIFRHMK 360 IDAWRKFFHR FGMVEAELST SSLFQAELVI KNFAFASYLT LDRNGQCLIV GWKGSPQLSL 420 SVWKFHQNKR RTALRIL*
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