PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10007045m
Common NameCICLE_v10007045mg
Organism
Citrus clementina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bZIP
Protein Properties Length: 134aa    MW: 15715 Da    PI: 9.9006
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10007045mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-091978463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      k+ +r+++NRe+A+rsR++++++++ L +++++++++  +L  + + l++    l +e+
  Ciclev10007045m 19 EKKRKRMASNRESAKRSRLKREQRVKDLVNEIATMKEQIFELNGQYNDLSQRTRILLQEN 78
                     5999*********************************99999988888887776666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-91680IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.2E-71889No hitNo description
PROSITE profilePS502179.8871881IPR004827Basic-leucine zipper domain
PfamPF001703.3E-72077IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-92071No hitNo description
CDDcd147029.87E-112172No hitNo description
PROSITE patternPS0003602338IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MSLSCKRSEY EARYANMDEK KRKRMASNRE SAKRSRLKRE QRVKDLVNEI ATMKEQIFEL  60
NGQYNDLSQR TRILLQENQA LKVEKAKLAE YLDNLCSICM RFRQMQSGCF SNQPWQQAYS  120
QMQPIITTGM SES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006419404.14e-94bZIP transcription factor 53
TrEMBLA0A2H5N7W61e-92A0A2H5N7W6_CITUN; Uncharacterized protein
TrEMBLV4U0921e-92V4U092_9ROSI; Uncharacterized protein
STRINGXP_006419404.12e-93(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30362763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.18e-16basic region/leucine zipper motif 53