PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ciclev10021585m
Common NameCICLE_v10021151mg
Organism
Citrus clementina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BES1
Protein Properties Length: 279aa    MW: 29435.7 Da    PI: 5.8101
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ciclev10021585mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82239.61.9e-12249869150
           DUF822  69 yrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.asllpvlsvlslvsssl 150
                      + +g+kp e+++++g sa asp+ss++        +sp++sy++sp+sssfpsp+s++ + + ++ +sl+p+l++ls++sss+
  Ciclev10021585m  24 FLQGCKPVERMDIVGGSAVASPCSSYH--------PSPCASYNPSPTSSSFPSPASSSYAANPNSdNSLIPWLKNLSSASSSA 98 
                      669************************........*******************9988776665559*********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.1E-122492IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MPIFTIENLL TNYYLFMQLN VHLFLQGCKP VERMDIVGGS AVASPCSSYH PSPCASYNPS  60
PTSSSFPSPA SSSYAANPNS DNSLIPWLKN LSSASSSASS SKLPHLYIHT GSISAPVTPP  120
LSSPTARTPR MKSDWEDQSS RPGLGGQHYS FLPSSTPPSP GRQIVPDPEW FAGIRLPHGA  180
PTSPTFSLVA SNPFGFKDET LAGGGSRMWT PGQSGTCSPA IAAGSDHTAD VPMSEVVTDE  240
FAFGSNATGL VKAWEGERIH EECGSDDLEL TLGSSRTR*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006442380.10.0BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_024044188.10.0BES1/BZR1 homolog protein 4 isoform X2
SwissprotQ9ZV881e-104BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLV4VRE30.0V4VRE3_9ROSI; Uncharacterized protein
STRINGXP_006442380.10.0(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.17e-90BES1/BZR1 homolog 4