PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla000383
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 253aa    MW: 28096.4 Da    PI: 4.7618
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla000383genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1482.6e-15198250455
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHH CS
     bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkke 55 
                 +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L ++e   lk++
  Cla000383 198 QQKQRRMIKNRESAARSRERKQAYTLELESLVTQLEQENARLlREEYWPLKEM 250
                689************************************99625566666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.3E-11195253IPR004827Basic-leucine zipper domain
PfamPF001701.6E-13197249IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795197242IPR004827Basic-leucine zipper domain
CDDcd147073.04E-20199241No hitNo description
SuperFamilySSF579595.94E-11199244No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-14200242No hitNo description
PROSITE patternPS000360202217IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MASSNVEMAS TSKTNPDLPR QSSVCSISTI IADLHHTDPS RNLASMSMDD LLKNIYSDAQ  60
THNQVQDENP IIGSSISPQD TFPLPKELST RTVEEVWKEI VAGGDQQRRE SATDQEITLE  120
DFLSKAGAVC DDDVRVPVIS EPGGFAVDST LNNQLQIPSQ QLEGPMVGGY ASGIDGRIVG  180
VGRGKRRAVE EPVDKATQQK QRRMIKNRES AARSRERKQA YTLELESLVT QLEQENARLL  240
REEYWPLKEM SLK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818421e-133LN681842.1 Cucumis melo genomic scaffold, anchoredscaffold00022.
GenBankLN7132591e-133LN713259.1 Cucumis melo genomic chromosome, chr_5.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022989686.11e-147G-box-binding factor 4-like isoform X3
TrEMBLA0A0A0KEF11e-120A0A0A0KEF1_CUCSA; Uncharacterized protein
STRINGXP_004158618.11e-120(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.14e-30bZIP family protein