PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla002778
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family GeBP
Protein Properties Length: 200aa    MW: 23573.9 Da    PI: 9.6475
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla002778genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.21.1e-1328113797
     DUF573   7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                ws+  e+ l + li+f++k+        ++fy f+++   ++vsk q+++Ki++LK+ + +k+ + ++ + ++++ e+d++ifels+++Wg
  Cla002778  28 WSKGEEVNLVKKLIEFRTKKMG-----DEEFYPFLRNGSLAEVSKIQIFNKIQQLKNEYLEKKLELRKMRIKHLKYENDDEIFELSNRLWG 113
                ****************888763.....479***********************************999**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.1E-1128113IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MGEEKEGEKS SLGSEKKERR RKKSLFEWSK GEEVNLVKKL IEFRTKKMGD EEFYPFLRNG  60
SLAEVSKIQI FNKIQQLKNE YLEKKLELRK MRIKHLKYEN DDEIFELSNR LWGEVETTGS  120
TSTSKALDVC SRSYFEGFFD GHGLHVQLFT PSFLHSTNKD IHHLFSLQNH HFLIKANLKA  180
QLAQLKYHII QHPYNNPTNL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0A0KPQ55e-55A0A0A0KPQ5_CUCSA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3105722