PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cla007950

Organism

Citrullus lanatus

Taxonomic ID

3654

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus

Family

bZIP

Protein Properties

Length: 146aa MW: 17595.9 Da PI: 8.2369

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cla007950	genome	ICuGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.9	1.4e-15	62	120	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK++ ++eL ++L ++N++L ++l +l + ++l +e+ Cla007950 62 RKQRRMISNRESARRSRMRKQKHVKELWSQLAQLCTQNHDLEEKLRHLMESQQRLLQEN 120 79*****************************************************9998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.6E-16	58	122	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.174	60	123	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.2E-11	62	118	No hit	No description
Pfam	PF00170	8.8E-14	62	120	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.95E-12	62	113	No hit	No description
CDD	cd14702	5.95E-12	63	111	No hit	No description
PROSITE pattern	PS00036	0	65	80	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MDLPSEIPEE TQLLLGAEEK YFWTIERNDL QNMISSDQFC RPTSNYNNNN NRRSAEIMVD 60 ERKQRRMISN RESARRSRMR KQKHVKELWS QLAQLCTQNH DLEEKLRHLM ESQQRLLQEN 120 ASLKQQASAF RQILRDMELE QLVTQF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	81	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008445746.2	2e-61	PREDICTED: basic leucine zipper 43-like
TrEMBL	A0A1S3BCY9	4e-60	A0A1S3BCY9_CUCME; basic leucine zipper 43-like
STRING	XP_008445746.1	4e-62	(Cucumis melo)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF31121	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	9e-29	basic leucine-zipper 42