PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla008141
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 240aa    MW: 27292 Da    PI: 8.735
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla008141genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.7e-11110167562
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                ++ +r ++NR++A++sR++K ++++  e+k k+Lea    L  ++e ++++ + l++e
  Cla008141 110 RKLKRIMSNRVSAQKSRLKKVQYVADMERKLKALEAHIAVLSPQVELYRNQQQVLQME 167
                57899*************************************9999999998877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.8E-10106170IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186108171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-11110165No hitNo description
SuperFamilySSF579593.38E-10110164No hitNo description
PfamPF001702.1E-9110167IPR004827Basic-leucine zipper domain
CDDcd147035.95E-18111162No hitNo description
PROSITE patternPS000360113128IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MELCSVPVST YPPITVGPDN RCLVNDSVRT TVSPDNRRLL KDSVTDWRRS FVVGCRREDE  60
EGGRAVQLPP FSKIGGGEMN SGGDGAENVD GRNPEQILYG RNIEPNMDPR KLKRIMSNRV  120
SAQKSRLKKV QYVADMERKL KALEAHIAVL SPQVELYRNQ QQVLQMEQKR LNQKILNCSR  180
NKLLRDAEIE ENRAEVNRLR ELHMKQQCEA NGWDSNVFTM PPDLHASELS NIVSPQPTQT
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819261e-38LN681926.1 Cucumis melo genomic scaffold, anchoredscaffold00044.
GenBankLN7132661e-38LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008457560.11e-120PREDICTED: basic leucine zipper 34-like
TrEMBLA0A1S3C5D91e-118A0A1S3C5D9_CUCME; basic leucine zipper 34-like
STRINGXP_008457560.11e-119(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148181113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.22e-22bZIP family protein