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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Cla008675 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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| Family |
C2H2 |
| Protein Properties |
Length: 293aa MW: 31649.5 Da PI: 4.5322 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla008675 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.4 | 0.00011 | 165 | 188 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C+ C++sF + L++H + H
Cla008675 165 FSCKSCDRSFGSDGALQSHSKAkH 188
89*****************88777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MSDSDFGSED EELALLPPEN GKPSQKEKSI AGNLLSQKPE SSKKADVKSL EPNKEDGDDS 60
EDDDDSDSDE DSDDESDEEM LGADSDSDDE DDGTGSDEET PKKVESAKKR PNESANKTPV 120
SKKAKLASTE KTESKKGGHT ATPHPAKKPV KTPSKAETPK SGGQFSCKSC DRSFGSDGAL 180
QSHSKAKHGG VEVKPGQALS VKPGEQKYVH ISQATLGEIK KDKANEPVTV FLKINDQKLV 240
LGILSAEKFP QISFDLVFEK EFELSHNGKS GSIYCLGYRA SADDQEQYPY FSI
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
