PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla009958
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 155aa    MW: 18414 Da    PI: 10.226
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla009958genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.52.6e-1257115563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +r +r+++NRe+ArrsR+RKk  +e+L+   + L+ +N++Lk +l+   + ++ ++ ++
  Cla009958  57 RRRKRMISNRESARRSRLRKKRHLENLAVQTDRLKMKNQELKRQLNLVVNRCYMVRRQN 115
                799********************************************999999877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-1253117IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-954108No hitNo description
PROSITE profilePS5021710.6855118IPR004827Basic-leucine zipper domain
PfamPF001704.3E-1156115IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-1057108No hitNo description
CDDcd147024.74E-1458108No hitNo description
PROSITE patternPS0003606075IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MFYSEEEEVV GFPGPAQEPR FTPAKIQELW SLLEDPTRSS SGSQGSCQAV SLIDEERRRK  60
RMISNRESAR RSRLRKKRHL ENLAVQTDRL KMKNQELKRQ LNLVVNRCYM VRRQNERLWS  120
EFVALHARLS DLYRISVPMQ EKENSCMQIS FNYFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15877RKRMISNRESARRSRLRKKR
26975RRSRLRK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818611e-137LN681861.1 Cucumis melo genomic scaffold, anchoredscaffold00029.
GenBankLN7132611e-137LN713261.1 Cucumis melo genomic chromosome, chr_7.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016901301.14e-92PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1S4DZ839e-91A0A1S4DZ83_CUCME; bZIP transcription factor 53-like
STRINGXP_008452673.12e-90(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.17e-25basic leucine-zipper 5