PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla011295
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 379aa    MW: 41421.2 Da    PI: 8.8914
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla011295genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.42.3e-16200255358
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                + kr rr+ +NRe+ArrsR+RK+a + eLe+ v+eL  eN+aL k+   +++++ +
  Cla011295 200 SAKRVRRMLSNRESARRSRKRKQAHLTELETQVAELRVENSALLKRFGDISQKYNE 255
                78********************************************9999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-18198262IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.1E-12199253No hitNo description
PROSITE profilePS5021711.231200255IPR004827Basic-leucine zipper domain
PfamPF001708.0E-14200253IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11202252No hitNo description
CDDcd147024.22E-16203254No hitNo description
PROSITE patternPS000360205220IPR004827Basic-leucine zipper domain
PfamPF124983.7E-16269316IPR020983Basic leucine-zipper, C-terminal
PfamPF124986.5E-11317366IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MIDRVFSVDG ISDHFWTSPE ESSKLNRSAS EWSFRRFLQE AASVSDSSIS PPPASPSAAE  60
IRSNAVEIRE KQSNQNVGVM KEREICSSSA REKSRAAAAA DSDEYQAFLK SKLNLACAAV  120
ALCRGSFMKT QDSCASSTQA GASHLTSQSS SKGISCSPCV QKRAGILVSS ANISSSREQT  180
DEDDDVEGEN NMNEQIDPAS AKRVRRMLSN RESARRSRKR KQAHLTELET QVAELRVENS  240
ALLKRFGDIS QKYNEAAVNN RVLKADLETL RAKVQMAEET VKRITGMKSM VHAMSEVSSI  300
SIHSFEGSPS EISTDAPNNH IADISSANIQ KNSLEMATVS RNKMARTASM RRVASLEHLQ  360
KRIRGSSSSC HPSGKGDQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214220RRSRKRK
2214221RRSRKRKQ
3216221SRKRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818061e-121LN681806.1 Cucumis melo genomic scaffold, anchoredscaffold00025.
GenBankLN7132561e-121LN713256.1 Cucumis melo genomic chromosome, chr_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008450742.10.0PREDICTED: light-inducible protein CPRF2-like
RefseqXP_008450743.10.0PREDICTED: light-inducible protein CPRF2-like
SwissprotQ990901e-100CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A1S3BPV60.0A0A1S3BPV6_CUCME; light-inducible protein CPRF2-like
STRINGXP_008450742.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.26e-74bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]