PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla014048
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 217aa    MW: 25283.3 Da    PI: 7.6375
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla014048genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.2e-1195140550
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                ++ rr+++NRe+ArrsR RK++ +e+L++ v +L+ eN++L ++l 
  Cla014048  95 RKRRRMESNRESARRSRMRKQKHLENLRNLVNKLKVENRELSNRLR 140
                57899************************************96664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-989139No hitNo description
SMARTSM003389.4E-1491155IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.17493156IPR004827Basic-leucine zipper domain
PfamPF001701.3E-895140IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.83E-995143No hitNo description
CDDcd147029.47E-1896140No hitNo description
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MLSTFPTASA YESMLENPFP AVNGTSTPWE CHDHDHDPEF LPVVSQMTEP TGLFDVFHSP  60
NPVISSSSSE NRDEPEPMDA GPCAPDRKVE VIDERKRRRM ESNRESARRS RMRKQKHLEN  120
LRNLVNKLKV ENRELSNRLR FTVYEVNRVR TENDHLQTEH TILRQKLSYS RQVLIFRQFQ  180
RQLAFASPYS ALEQPPTISQ SQSQYILNNN NNNLINC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19498RKRRR
294115RKRRRMESNRESARRSRMRKQK
3107114RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022950362.11e-106bZIP transcription factor RISBZ2-like
TrEMBLA0A0A0KJR41e-101A0A0A0KJR4_CUCSA; Uncharacterized protein
STRINGXP_008440425.11e-107(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-30basic leucine-zipper 6