PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla015138
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 127aa    MW: 15013.5 Da    PI: 11.7147
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla015138genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.43.7e-091421051
               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
               +q+NRe+ArrsR +K+++ + L+ +v  L+  N++  + +++
  Cla015138  1 MQSNRESARRSRMKKQKQFQDLTSEVRRLQIVNSRIVESVNS 42
               79****************************999888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.1E-7144No hitNo description
SMARTSM003380.0082159IPR004827Basic-leucine zipper domain
PfamPF001701.1E-6142IPR004827Basic-leucine zipper domain
CDDcd147028.50E-11146No hitNo description
SuperFamilySSF579595.2E-8145No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MQSNRESARR SRMKKQKQFQ DLTSEVRRLQ IVNSRIVESV NSREQARIEI ETMNNLLRVE  60
AMETTYRLKA LDLVLQIVDK ANALAVGVRD PLLEPWQLTS KGSCRRRRRI TIRFFFNAVL  120
FLTCRIF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008451653.19e-49PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1S3BS272e-47A0A1S3BS27_CUCME; bZIP transcription factor 53-like
STRINGXP_008451653.14e-48(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2471833
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.11e-21basic region/leucine zipper motif 53