PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla015627
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 331aa    MW: 36922 Da    PI: 5.7521
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla015627genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.41e-10191234548
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Cla015627 191 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 234
                899*********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14187251IPR004827Basic-leucine zipper domain
PfamPF077162.7E-9188236IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622189241IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.02E-11191245No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-11191242No hitNo description
CDDcd147032.07E-22192242No hitNo description
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MAQLPPKIPN MTPNWPDFSR QKIPSMETFA PPTTTPAVTQ NNPSWVDEFL DFSSARRGSH  60
RRSVSDSITF LEMPMLEEDC RTAAAAPPPP PPGSGDRNEF DRFDDEQFLS MFNDEISAAV  120
APTLSSSNPS TPSDHNSIND EKDAQNDGKQ NQNKNESDEV QSQQQSENQT QSNSMATAAT  180
AASTDRITDP KRVKRILANR QSAQRSRVRK LQYISELERS VTSLQAEVSV LSPRVAFLDH  240
QRLLLNVDNS ALKQRIAALA QDKIFKDAHQ EALKREIERL RQVYHQQNIK KMENNAAPSP  300
AITPSRPVTA IATDAKLPNI DQNEQVPNIV V
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004144514.10.0PREDICTED: basic leucine zipper 61
SwissprotQ9M2K41e-124BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0A0K6T00.0A0A0A0K6T0_CUCSA; Uncharacterized protein
STRINGXP_004144514.10.0(Cucumis sativus)
STRINGXP_004165677.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-68bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]