PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla016491
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 184aa    MW: 21619 Da    PI: 6.6305
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla016491genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16.2e-1686144563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++l++ ++  +k+ +e+
  Cla016491  86 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNQVSDCHDKVVQEN 144
                689********************************************998877776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-1582146IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.42784147IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-1286159No hitNo description
SuperFamilySSF579598.13E-1486135No hitNo description
PfamPF001705.3E-1486143IPR004827Basic-leucine zipper domain
CDDcd147023.92E-1987138No hitNo description
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MQPGEVTSLQ YLIPSNLSPY ATHFPMAQNN LPTMQLNEFS NNEFSNPLYN FQGPSQVHDF  60
NRHPCLSSNS TSDEADEQQQ SLINERKQRR MISNRESARR SRMRKQKHLD ELWSQVVWLR  120
NENHQLIDKL NQVSDCHDKV VQENAQLKEQ TSELRRMLTE VQVNSHYPNF RELEKIPPNT  180
PSES
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198105RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818890.0LN681889.1 Cucumis melo genomic scaffold, anchoredscaffold00051.
GenBankLN7132630.0LN713263.1 Cucumis melo genomic chromosome, chr_9.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004141481.11e-120PREDICTED: basic leucine zipper 43-like
TrEMBLE5GCT01e-122E5GCT0_CUCME; BZIP transcription factor
STRINGXP_008459417.11e-122(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.17e-53basic leucine-zipper 42