PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla019641
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family BES1
Protein Properties Length: 327aa    MW: 35190.3 Da    PI: 8.4856
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla019641genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222091.3e-6421471150
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                +++ r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp  e +++g sasasp+ss+q     
  Cla019641   2 TSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPV-ERDIMGGSASASPCSSYQ----- 95 
                5789************************************************************************.99****************..... PP

     DUF822 101 salaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsssl 150
                   +sp++sy++sp+sssfpsp+s+  + + ++     +sl+p+l++ls+ sss+
  Cla019641  96 ---PSPRASYNPSPASSSFPSPTSSRYAINGNDnatdpNSLIPWLKNLSSGSSSA 147
                ...*******************9977654333348889**********9977764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.1E-654141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MTSGSRMPTW KERENNKRRE RRRRAIAAKI FLGLRMYGNY KLPKHCDNNE VLKALCDEAG  60
WTVEEDGTTY RKGCKPVERD IMGGSASASP CSSYQPSPRA SYNPSPASSS FPSPTSSRYA  120
INGNDNATDP NSLIPWLKNL SSGSSSASSR LPHHLFITCG SISAPVTPPS SSPTARTPRK  180
PNDWDNHPAV APAWAAQRFS CLPASTPPSP GRQVLADPAW LDSMRIPQSG PSSPTFSLVA  240
RNPFGFKEAM SAGGSRNWTP AQSGTCSPTV AAGTDHTIDV PMMDGTAAEF AFGSCSVGIV  300
KPWEGERIHE ECISDDLELT LGNSSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24686372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24686372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24686372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24686372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819320.0LN681932.1 Cucumis melo genomic scaffold, anchoredscaffold00001.
GenBankLN7132660.0LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004147390.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-121BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0A0M0730.0A0A0A0M073_CUCSA; Uncharacterized protein
STRINGXP_004172293.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-92BES1/BZR1 homolog 4