PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla021203
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family WRKY
Protein Properties Length: 123aa    MW: 14049.7 Da    PI: 8.0506
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla021203genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.82.9e-1094114121
                ---SS-EEEEEEE--TT-SS- CS
       WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                ldDgy+WrKYGqK vk s +p
  Cla021203  94 LDDGYRWRKYGQKAVKHSLHP 114
                59****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-1082114IPR003657WRKY domain
SuperFamilySSF1182901.44E-887116IPR003657WRKY domain
PROSITE profilePS5081111.69289114IPR003657WRKY domain
SMARTSM007740.009494122IPR003657WRKY domain
PfamPF031061.4E-695114IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MEEYGKLQYP PPPPSPPPPC SDPDATPLEI DWIAVLSDQE VTGDLAAAAA TCESSETRRD  60
EEKGERRKKG GRRWRRTAGC RRFEFQTRSA EDILDDGYRW RKYGQKAVKH SLHPSIFNNQ  120
AKF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004134318.16e-47PREDICTED: probable WRKY transcription factor 43
TrEMBLA0A0A0L6351e-45A0A0A0L635_CUCSA; Uncharacterized protein
STRINGXP_004155886.12e-46(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.22e-13WRKY DNA-binding protein 43