PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla022235
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 327aa    MW: 35948.1 Da    PI: 5.4728
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla022235genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.98.3e-17161214356
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                +lkr rr+++NR +ArrsR+RK+a ++eLe+ vk+L++eN++L ++l   ++++
  Cla022235 161 ALKRIRRMISNRDSARRSRRRKQAHLAELENQVKQLKGENETLFNQLLDASQQY 214
                69*****************************************97776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-16159223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.818161224IPR004827Basic-leucine zipper domain
PfamPF001701.7E-14161207IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-12163212No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-13163214No hitNo description
PROSITE patternPS000360166181IPR004827Basic-leucine zipper domain
CDDcd147021.90E-7181215No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MKRSASELAL EEFLKKAAII SPDDDVIDPD DEDVFKIEQQ QIIRSPKRGR NFQDSADATC  60
FFGDIDFSCF LVKNNREIMD AIVNCGGGLA EAPLWSQNLT PKHSSFSATI DSQSSIVSSP  120
TSASNLMGRE HQRGNNSGSS EDQSDDEIEA GSCEQSTDPL ALKRIRRMIS NRDSARRSRR  180
RKQAHLAELE NQVKQLKGEN ETLFNQLLDA SQQYRDANTN NRVLKSDVDA LRAKVKLAED  240
TLARGSMTCS LNQLLQSHLS TPQPLTALRR MSNVAPPLGL PGDEVSYSCV TMSGQNPTVG  300
LPNSDMHMKT GMGSEAVSCV SGIWPRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175182RRSRRRKQ
2177182SRRRKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818232e-47LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132572e-47LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011649748.10.0PREDICTED: basic leucine zipper 9
TrEMBLA0A0A0LLM90.0A0A0A0LLM9_CUCSA; Uncharacterized protein
STRINGXP_004160778.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.16e-61basic leucine zipper 9